Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938871.1_cds_XP_016483604.1_74703
CDS Infomation

[gene=LOC107804265] [db_xref=GeneID:107804265] [protein=probable beta-1,4-xylosyltransferase IRX9H] [protein_id=XP_016483604.1] [location=join(60053..60954,61350..61599,61808..61975)] [gbkey=CDS]
Sequence

ATGGCTTCAATTAGAAGAACATTGTCCCCAGTGCCTCGTCCTGGTAGTACTATGAATGGA
GAGGCATGTCTTGTTGCCTCTCCTTTGTCCAAGTCATCATCATGTACTCATAGCTATACA
CCAACTGGTACATTGCTGTCTTCTCTTGGTTCATTGGATTATGCGTTGTGCAAGGTTCAA
ACATTTGTACTTGGTCTTTTGTCACGAAGATCTTCTAGGCCATTGGAGAGGTCAAAGTTG
AAGGGGCTCATTTGGAGGAGAGCTCTTTTACAATTCTTTATCTGCTTTGTTCTTGGAGTA
TTTATTGGTCTTACTCCATTTGTTTCACTAAATTTGTCTACAAATTTTATATCTAAACAT
CAAGCTTTCTCCTTTGAGGTCGAAGAAAATGCTCGCTCATATGACGTATCTAGAAATGTG
ACTTCAACCACTGAGAACTTGCCTATCGTGGATAATTCGACATCAGAGCCTAACTTAGTA
CATGTTGAACTGAAAAAAGAAATTGCCAACAATGCCTCCTTTAACCAATCACTTGAACAA
GAGTTTATGTTGTCCCGTAAACTTTTGATAATTGTGACGCCTACAGAAACTCGGCCATTT
CAAGCATACTATCTGAATCGTCTAGCCTATGGATTAAAGTTGGTGCCTTCTCCTTTGTTG
TGGATAGTTGTTGAGATGAACTCTCAGTCTGTTGAAACTGCTGATATATTGAGAAGAACT
GGAGTTATGTACAGGCATCTTGTGTGCTGCAAGAACTTAACTGATGTGAAAGAAAAAAAT
GTGCACCTAAGGAATGTTGCACTCTCTCACATTGAAACACACCATCTCGATGGTATTGTC
TATTTTGCTGATGAGTACAACATATACTCTGCTGATTTATTCGAGCAGATGAGACAGATC
AGCCGGTTCGGGACATGGATTGTGGCAAGACTAGCTGAAAATAATAGGAACGTTATCTTG
CAGGGTCCAATCTGTAACGCCTCTCTGGTTATAGGTTGGCACACTGAAGGTAGAGCAAAA
AGATTTCAGAGATTCTCTGCAGAAATATCGGGATTTGCGTTCAATAGTACGATACTTTGG
GATCCTAAGAGGTGGCACCGACCAACACTAGAACCTATAAGGCAGTCTGATACAGCCAGA
GCTGGTTCCCAAGTGAGCACATTTATTGAACAAGTGGTAGAAGATGAAAGCCAAATGGAA
TGCTTACCAATGCACTGTTCAAGAATCATGGTTTGGCAATTCAACACAGAAATATTGTAC
CCATATCCTCATGAGTGGCTGGTGAAGAATTACTCAAGCACCATTACTTCAGTTGGATAA

Peptide Sequence

PEP ID

XP_016483604.1
PEP Infomation

PREDICTED: probable beta-1,4-xylosyltransferase IRX9H [Nicotiana tabacum]
Sequence

MASIRRTLSPVPRPGSTMNGEACLVASPLSKSSSCTHSYTPTGTLLSSLGSLDYALCKVQ
TFVLGLLSRRSSRPLERSKLKGLIWRRALLQFFICFVLGVFIGLTPFVSLNLSTNFISKH
QAFSFEVEENARSYDVSRNVTSTTENLPIVDNSTSEPNLVHVELKKEIANNASFNQSLEQ
EFMLSRKLLIIVTPTETRPFQAYYLNRLAYGLKLVPSPLLWIVVEMNSQSVETADILRRT
GVMYRHLVCCKNLTDVKEKNVHLRNVALSHIETHHLDGIVYFADEYNIYSADLFEQMRQI
SRFGTWIVARLAENNRNVILQGPICNASLVIGWHTEGRAKRFQRFSAEISGFAFNSTILW
DPKRWHRPTLEPIRQSDTARAGSQVSTFIEQVVEDESQMECLPMHCSRIMVWQFNTEILY
PYPHEWLVKNYSSTITSVG

Transcript Sequence

Gene sequence data has not been registered.